Jyot Antani, PhD

Jyot Antani, PhD

Scientist

Yale University

About

I develop microscopic tools to quantify how viruses interact with their hosts, currently using bacteriophages (viruses of bacteria) as a model system. This research supports the development of phage therapy strategies to combat antimicrobial resistance—a major public-health challenge. Some of my work has been published and is linked below.

At Yale, I am affiliated with the following entities:

My PhD research was in Pushkar Lele Lab at Texas A&M University. It focused on the physics of how bacteria move and sense their surroundings. My thesis dissertation (2021) was titled Sensory Functions of the Bacterial Flagellar Motor.

I took an advanced summer course on microscopy in 2022: Optical Microscopy & Imaging in the Biomedical Sciences at Marine Biological Laboratories, Woods Hole, MA (USA). Having fallen in love with the course, I have been going back as a Research Facilitator.

I contribute to scientific service and open science through editorial/society roles, method-sharing, and community outreach. To this end, I…

  • serve on the editorial board of mSystems, a non-profit journal by the American Society for Microbiology (ASM)
  • serve as a councilor at ASM’s Connecticut Valley Branch
  • use Foldscopes to teach local middle school students about microscopy
  • have written 1 article (and counting) to explain my science to a high-school educated audience
  • made a video explaining the protocol to make agarose pads for microscopic visualization of bacteria

Education

Ph.D. in Chemical Engineering

Texas A&M University (USA)

B.Tech. with Honours in Chemical Engineering

IIT Bombay (India)

Interests

Microscopy Antimicrobial Resistance Biophysics Virology Genetic Technology Biomedical Engineering
Key Publications

Full list of publications: Google Scholar profile ↗

Rage Against the Mean: Perspective on measuring single-virus traits featured image

Rage Against the Mean: Perspective on measuring single-virus traits

We wrote a perspective on the need and recently developed approaches to study individual virus traits in the most numerous viruses on our planet (phages).

A microscopic way to measure virus attachment featured image

A microscopic way to measure virus attachment

We replaced a (literally) century-old laborious assay to measure the attachment of viruses to bacteria. We developed a fast and efficient microscopy-approach to measure attachment …

Evolution against a virus that attacks bacterial flagella featured image

Evolution against a virus that attacks bacterial flagella

Phage χ can only infect E. coli with functional rotating flagella!! We studied what happens when bacteria are forced to evolve against this phage. We found: some bacteria swim …

Synthetic bacteriophages featured image

Synthetic bacteriophages

New England Biolabs (NEB) developed a Golden Gate method to engineer synthetic bacteriophages. I validated the expression of fluorescent proteins engineered into synthetic phage …

Outsmarting Bacterial Evolution in Phage Therapy featured image

Outsmarting Bacterial Evolution in Phage Therapy

Bacteria are great at evolving resistance to anything that we throw at them. This has caused antibiotic resistance crisis. We discuss smart approaches to use phages, viruses …

Molecular Mechanisms of Mechanical Force Sensing by Bacterial Flagellar Motors featured image

Molecular Mechanisms of Mechanical Force Sensing by Bacterial Flagellar Motors

The flagellar motor in E. coli can sense mechanical forces. We discovered a mechanism involved in this sensing. See Tweetorial for a quick explanation.

Single-cell Motility and Chemotaxis of Helicobacter pylori featured image

Single-cell Motility and Chemotaxis of Helicobacter pylori

H. pylori is a bacterium implicated in ulcers and cancers of the stomach. We studied their behavior in response to chemical gradients and the biophysical principles involved in …

Role of Bacterial Flagella in Surface Sensing featured image

Role of Bacterial Flagella in Surface Sensing

Flagella are involved in the earliest stages of surface colonization by bacteria. We review the current understanding and challenges in Section 1 of an invited topical review.

Orthogonal Imaging Chamber featured image

Orthogonal Imaging Chamber

The orthogonal cross‐sectional profiles (side-views) of fluorescent objects can be distorted when reconstructed from confocal image-slices (aka z-stacks). We designed a chamber to …

Cell Nucleus Migration through Stiff Tissue-esque Scaffold featured image

Cell Nucleus Migration through Stiff Tissue-esque Scaffold

Intuition suggests that the stiff cell nucleus should be rupture-prone when forced to pass through obstacles. Instead, it behaves like an oil drop during migration, passing …

Science Outreach

Communicating Science to the Layperson

I serve as an Executive Editor at the Journal of Life Sciences, a postdoc-led community initiative. Through our JoLS-Pub program, we invite scientists to write summary articles that explain their recently published technical research in language accessible to a high-school–educated audience.

Tiny World for Little Humans

Taught Foldscope (cost-effective paper microscopes) to middle school children at Fair Haven School, New Haven, CT. They were excited to learn and took their own microscopes home.

For the quantitative part of the microscopy, the students were introduced to calibration slides for calculating the actual sizes of samples.

LabLeaks

LabLeaks was a biweekly mailing list that talked about the latest science.

It was an effort by a few scientists who were passionate about open science communication, and who thought that they were (are) hilarious.